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Das, R. Evolutionary design of collective computation in cellular automata. In J. P. Crutchfield and P. K. Schuster (editors), Evolutionary Dynamics—Exploring the Interplay of Selection, Neutrality, Accident, and Function. New York: Oxford University Press, 2003, pp. 361–411.

Crutchfield, J. P. and Shalizi, C. R. Thermodynamic depth of causal states: When paddling around in Occam’s pool shallowness is a virtue. Physical Review E, 59 (1), 1999, pp. 275–283.

Crutchfield, J. P. and Young, K. Inferring statistical complexity. Physical Review Letters 63, 1989, pp. 105–108.

Cupitt, R. T. Target rogue behavior, not rogue states. The Nonproliferation Review, 3, 1996, pp. 46–54.

Cupitt, R. T. and Grillot, S. R. COCOM is dead, long live COCOM: Persistence and change in multilateral security institutions. British Journal of Political Science 27, 1997, pp. 361–389.

Darwin, C. The Autobiography of Charles Darwin. Lanham, MD: Barnes & Noble Publishing, 2005. Originally published 1887.

Darwin, C. and Barlow, N. D. The Autobiography of Charles Darwin (Reissue edition). New York: Norton, 1993. [Originally published 1958.]

Darwin, E. The Temple of Nature; or, The Origin of Society: A Poem with Philosophical Notes. London: J. Johnson, 1803.

Dawkins, R. The Extended Phenotype (Reprint edition). New York: Oxford University Press, 1989. (Originally published 1982.)

Dean, W., Santos, F., Stojkovic, M., Zakhartchenko, V., Walter, J., Wolf, E., and Reik, W. Conservation of methylation reprogramming in mammalian development: Aberrant reprogramming in cloned embryos. Proceedings of the National Academy of Science, USA, 98(24), 2001, pp. 13734–13738.

Dennett, D. R. Elbow Room: The Varieties of Free Will Worth Wanting. Cambridge, MA: MIT Press, 1984.

Dennett, D. R. Consciousness Explained. Boston: Little, Brown & Co, 1991.

Dennett, D. R. Darwin’s Dangerous Idea. New York: Simon & Schuster, 1995.

Descartes, R. A Discourse on the Method. Translated by Ian Maclean. London: Oxford World’s Classics, Oxford University Press, 2006 [1637].

Dietrich, M. R. The origins of the neutral theory of molecular evolution. Journal of the History of Biology, 27(1), 1994, pp. 21–59.

Dorigo, M. and Stützle, T. Ant Colony Optimization, MIT Press, 2004.

Dover, G. A. On the edge. Nature, 365, 1993, pp. 704–706.

Dukas, H. and Hoffmann B. (editors). Albert Einstein, The Human Side: New Glimpses from His Archives. Princeton University Press, 1979.

Dunne, J. A. The network structure of food webs. In M. Pascual and J. A. Dunne (editors). Ecological Networks: Linking Structure to Dynamics in Food Webs. New York: Oxford University Press, 2006, pp. 27–86.

Dunne, J. A. Williams, R. J. and Martinez, N. D. Food-web structure and network theory: The role of connectance and size. Proceedings of the National Academy of Science, USA, 99(20), 2002, pp. 12917–12922.

Eddington, A. E. The Nature of the Physical World. New York: Macmillan, 1928.

Eigen, M. How does information originate? Principles of biological self-organization. In S. A. Rice (editor), For Ilya Prigogine. New York: Wiley 1978, pp. 211–262.

Eigen, M. Steps Towards Life. Oxford: Oxford University Press, 1992.

Einstein, A. Out of My Later Years (revised edition). Castle Books, 2005 [originally published 1950, New York: Philosophical Books.]

Eldredge, N. and Tattersall, I. The Myths of Human Evolution. New York: Columbia University Press, 1982.

Erwin, D. H. The developmental origins of animal bodyplans. In S. Xiao and A. J. Kaufman (editors), Neoproterozoic Geobiology and Paleobiology. New York: Springer, 2006, pp. 159–197.

Everdell, W. R. The First Moderns: Profiles in the Origins of Twentieth-Century Thought. Chicago, IL: University of Chicago Press, 1998.

Feigenbaum, M. J. Universal behavior in nonlinear systems. Los Alamos Science, 1(1), 1980, pp. 4–27.

Fell, D. A. and Wagner, A. The small world of metabolism. Nature Biotechnology, 18, 2000, pp. 1121–1122.

Felton, M. J. Survival of the fittest in drug design. Modern Drug Discovery, 3(9), 2000,

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